Function reference • find.dxgap

Download data

Verbs to download data to disk (e.g., from websites).

download_hbc(): TB High-Burden Countries data from WHO

download_wb() read_wb() tidy_wb(): Data from World Bank

download_who() read_who() tidy_who(): Data from WHO

Load data

Verbs to load and manage data on disk.

dxgap_master_list: Data dictionary

build_tbl(): Load all data for a disease into a single wide table

import_tbl(): Read and tidy any individual table

read_gf_procurement() tidy_gf_procurement(): Data from Global Fund

download_wb() read_wb() tidy_wb(): Data from World Bank

download_who() read_who() tidy_who(): Data from WHO

Clean data

Verbs to clean and transform data ready for analysis.

download_who() read_who() tidy_who(): Data from WHO

download_wb() read_wb() tidy_wb(): Data from World Bank

read_gf_procurement() tidy_gf_procurement(): Data from Global Fund

Analyse data

Verbs to analyse data.

compute_correlation(): Compute correlations with a target variable

compute_completion_rate(): Compute completion rate

compute_dx_gap(): Compute the diagnostic gap

get_mod_preproc(): Get pre-processing recipes

pull_mod_rank() pull_mod_best() pull_mod_coeff() pull_mod_fit() pull_mod_coeff_all(): Helpers to work out run_mod_lm()'s output

render_bulk(): Render templates across multiple years

render_report(): Render a template report

run_mod_lm(): Run a suite of statistical models

Helpers

view_templates(): List available templates

extract_vars(): Extract supported variables from dxgap_diseases meta table